Package: rncl 0.8.10

rncl: An Interface to the Nexus Class Library

An interface to the Nexus Class Library which allows parsing of NEXUS, Newick and other phylogenetic tree file formats. It provides elements of the file that can be used to build phylogenetic objects such as ape's 'phylo' or phylobase's 'phylo4(d)'. This functionality is demonstrated with 'read_newick_phylo()' and 'read_nexus_phylo()'.

Authors:Francois Michonneau [aut, cre], Ben Bolker [aut], Mark Holder [aut], Paul Lewis [aut], Brian O'Meara [aut]

rncl_0.8.10.tar.gz
rncl_0.8.10.zip(r-4.7-x86_64)rncl_0.8.10.zip(r-4.7-arm64)rncl_0.8.10.zip(r-4.6-x86_64)rncl_0.8.10.zip(r-4.6-arm64)rncl_0.8.10.zip(r-4.5-x86_64)
rncl_0.8.10.tgz(r-4.6-x86_64)rncl_0.8.10.tgz(r-4.6-arm64)rncl_0.8.10.tgz(r-4.5-x86_64)rncl_0.8.10.tgz(r-4.5-arm64)
rncl_0.8.10.tar.gz(r-4.7-arm64)rncl_0.8.10.tar.gz(r-4.7-x86_64)rncl_0.8.10.tar.gz(r-4.6-arm64)rncl_0.8.10.tar.gz(r-4.6-x86_64)
rncl_0.8.10.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rncl/json (API)

# Install 'rncl' in R:
install.packages('rncl', repos = c('https://fmichonneau.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/fmichonneau/rncl/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

newicknexusphylogeneticstree-parsingcpp

8.99 score 9 stars 38 packages 46 scripts 14k downloads 5 mentions 4 exports 12 dependencies

Last updated from:e06746ef82. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK172
linux-devel-x86_64OK185
source / vignettesOK209
linux-release-arm64OK163
linux-release-x86_64OK178
macos-release-arm64OK140
macos-release-x86_64OK401
macos-oldrel-arm64OK164
macos-oldrel-x86_64OK231
windows-devel-arm64OK470
windows-devel-x86_64OK237
windows-release-arm64OK388
windows-release-x86_64OK198
windows-oldrel-x86_64OK206
wasm-releaseOK152

Exports:make_phyloread_newick_phyloread_nexus_phylorncl

Dependencies:clicrayongluehmslifecyclepkgconfigprettyunitsprogressR6Rcpprlangvctrs

Readme and manuals

Help Manual

Help pageTopics
Read phylogenetic trees from filesmake_phylo read_newick_phylo read_nexus_phylo
rncl: An R interface to the NEXUS Class Libraryrncl-package rncl