Package: rncl 0.8.10

rncl: An Interface to the Nexus Class Library

An interface to the Nexus Class Library which allows parsing of NEXUS, Newick and other phylogenetic tree file formats. It provides elements of the file that can be used to build phylogenetic objects such as ape's 'phylo' or phylobase's 'phylo4(d)'. This functionality is demonstrated with 'read_newick_phylo()' and 'read_nexus_phylo()'.

Authors:Francois Michonneau [aut, cre], Ben Bolker [aut], Mark Holder [aut], Paul Lewis [aut], Brian O'Meara [aut]

rncl_0.8.10.tar.gz
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rncl_0.8.10.tgz(r-4.6-x86_64)rncl_0.8.10.tgz(r-4.6-arm64)rncl_0.8.10.tgz(r-4.5-x86_64)rncl_0.8.10.tgz(r-4.5-arm64)
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rncl_0.8.10.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rncl/json (API)

# Install 'rncl' in R:
install.packages('rncl', repos = c('https://fmichonneau.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/fmichonneau/rncl/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

newicknexusphylogeneticstree-parsingcpp

8.83 score 9 stars 37 packages 46 scripts 9.8k downloads 5 mentions 4 exports 12 dependencies

Last updated from:e06746ef82. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK147
linux-devel-x86_64OK171
source / vignettesOK302
linux-release-arm64OK139
linux-release-x86_64OK163
macos-release-arm64OK119
macos-release-x86_64OK329
macos-oldrel-arm64OK159
macos-oldrel-x86_64OK306
windows-devel-arm64OK418
windows-devel-x86_64OK228
windows-release-arm64OK420
windows-release-x86_64OK228
windows-oldrel-x86_64OK137
wasm-releaseOK112

Exports:make_phyloread_newick_phyloread_nexus_phylorncl

Dependencies:clicrayongluehmslifecyclepkgconfigprettyunitsprogressR6Rcpprlangvctrs

Readme and manuals

Help Manual

Help pageTopics
Read phylogenetic trees from filesmake_phylo read_newick_phylo read_nexus_phylo
rncl: An R interface to the NEXUS Class Libraryrncl-package rncl