Package: rncl 0.8.7
rncl: An Interface to the Nexus Class Library
An interface to the Nexus Class Library which allows parsing of NEXUS, Newick and other phylogenetic tree file formats. It provides elements of the file that can be used to build phylogenetic objects such as ape's 'phylo' or phylobase's 'phylo4(d)'. This functionality is demonstrated with 'read_newick_phylo()' and 'read_nexus_phylo()'.
Authors:
rncl_0.8.7.tar.gz
rncl_0.8.7.zip(r-4.5)rncl_0.8.7.zip(r-4.4)rncl_0.8.7.zip(r-4.3)
rncl_0.8.7.tgz(r-4.4-x86_64)rncl_0.8.7.tgz(r-4.4-arm64)rncl_0.8.7.tgz(r-4.3-x86_64)rncl_0.8.7.tgz(r-4.3-arm64)
rncl_0.8.7.tar.gz(r-4.5-noble)rncl_0.8.7.tar.gz(r-4.4-noble)
rncl_0.8.7.tgz(r-4.4-emscripten)rncl_0.8.7.tgz(r-4.3-emscripten)
rncl.pdf |rncl.html✨
rncl/json (API)
NEWS
# Install 'rncl' in R: |
install.packages('rncl', repos = c('https://fmichonneau.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fmichonneau/rncl/issues
newicknexusphylogeneticstree-parsing
Last updated 2 years agofrom:ff36e0a287. Checks:OK: 4 NOTE: 5. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 08 2024 |
R-4.5-win-x86_64 | NOTE | Oct 08 2024 |
R-4.5-linux-x86_64 | NOTE | Oct 08 2024 |
R-4.4-win-x86_64 | NOTE | Oct 08 2024 |
R-4.4-mac-x86_64 | NOTE | Oct 08 2024 |
R-4.4-mac-aarch64 | NOTE | Oct 08 2024 |
R-4.3-win-x86_64 | OK | Oct 08 2024 |
R-4.3-mac-x86_64 | OK | Oct 08 2024 |
R-4.3-mac-aarch64 | OK | Oct 08 2024 |
Exports:make_phyloread_newick_phyloread_nexus_phylorncl
Dependencies:clicrayongluehmslifecyclepkgconfigprettyunitsprogressR6Rcpprlangvctrs
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Read phylogenetic trees from files | make_phylo read_newick_phylo read_nexus_phylo |
rncl: An R interface to the NEXUS Class Library | rncl |